STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SATB1DNA-binding protein SATB1 isoform X1. (755 aa)    
Predicted Functional Partners:
UBE2I
Ubiquitin-conjugating enzyme E2 I.
    
  0.626
CASP6
Caspase 6.
    
 0.597
KCTD2
Potassium channel tetramerization domain containing 2.
    
  0.563
SUMO2
Small ubiquitin-related modifier 2.
    
 0.541
LOC113483651
Small ubiquitin-related modifier 3.
    
 0.541
ENSACUP00000000929
annotation not available
    
 0.460
SUMO1
Small ubiquitin-related modifier 1.
    
 0.460
CASP3
Caspase 3.
    
 0.444
LOC113490234
Caspase-3-like.
    
 0.444
UBL3
Ubiquitin-like protein 3 isoform X1.
      
 0.440
Your Current Organism:
Athene cunicularia
NCBI taxonomy Id: 194338
Other names: A. cunicularia, Speotyto cunicularia, burrowing owl
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.