STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LRP2Low-density lipoprotein receptor-related protein 2 isoform X1. (4345 aa)    
Predicted Functional Partners:
IHH
Indian hedgehog protein.
     
 0.911
BOC
Brother of CDO isoform X1.
     
  0.901
PTCH1
Protein patched homolog 1.
     
 0.901
AGRN
Agrin isoform X1.
    
 0.797
LDLRAP1
Low density lipoprotein receptor adapter protein 1.
    
 0.688
DAB2
DAB adaptor protein 2.
    
 0.680
ANKRA2
Ankyrin repeat family A protein 2.
    
 0.638
ENSACUP00000012979
annotation not available
    
 0.619
ITSN2
Intersectin-2 isoform X1.
    
 0.619
RELN
Reelin.
    
 0.582
Your Current Organism:
Athene cunicularia
NCBI taxonomy Id: 194338
Other names: A. cunicularia, Speotyto cunicularia, burrowing owl
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.