STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PIPOXSarcosine oxidase / L-pipecolate oxidase. (392 aa)    
Predicted Functional Partners:
SARDH
Sarcosine dehydrogenase, mitochondrial.
  
 0.974
DMGDH
Dimethylglycine dehydrogenase, mitochondrial.
  
 0.961
GLDC
Glycine dehydrogenase (decarboxylating), mitochondrial.
   
 
 0.958
AGXT2
Alanine-glyoxylate transaminase / (R)-3-amino-2-methylpropionate-pyruvate transaminase.
  
 
 0.945
SHMT1
Serine hydroxymethyltransferase, cytosolic.
    
 0.942
DAO
D-amino-acid oxidase isoform X1.
   
 
 0.931
GCAT
2-amino-3-ketobutyrate coenzyme A ligase, mitochondrial.
  
 
 0.927
ALAS1
5-aminolevulinate synthase, nonspecific, mitochondrial.
  
 
 0.912
GATM
Glycine amidinotransferase, mitochondrial.
     
  0.900
AMT
Aminomethyltransferase.
  
 0.699
Your Current Organism:
Athene cunicularia
NCBI taxonomy Id: 194338
Other names: A. cunicularia, Speotyto cunicularia, burrowing owl
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.