STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CFAP54LOW QUALITY PROTEIN: cilia- and flagella-associated protein 54. (377 aa)    
Predicted Functional Partners:
ENSACUP00000011778
annotation not available
   
  
 0.928
ENSACUP00000011709
annotation not available
 
     0.916
ENSACUP00000019960
annotation not available
   
 
 0.581
ST6GALNAC6
N-acetylgalactosaminide alpha-2,6-sialyltransferase (sialyltransferase 7F).
   
    0.528
RCL1
RNA 3'-terminal phosphate cyclase-like protein.
      
 0.506
WDPCP
WD repeat-containing and planar cell polarity effector protein fritz homolog isoform X1.
   
    0.443
C1D
Nuclear nucleic acid-binding protein C1D.
      
 0.400
Your Current Organism:
Athene cunicularia
NCBI taxonomy Id: 194338
Other names: A. cunicularia, Speotyto cunicularia, burrowing owl
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