STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RNF123Kip1 ubiquitination-promoting complex protein 1. (1317 aa)    
Predicted Functional Partners:
USP19
Ubiquitin specific peptidase 19.
   
 0.907
UBAC1
Ubiquitin-associated domain-containing protein 1 isoform X1.
   
 
 0.881
USP4
Ubiquitin carboxyl-terminal hydrolase 4 isoform X1.
   
 0.611
USP31
Ubiquitin carboxyl-terminal hydrolase 31.
   
 0.592
USP32
Ubiquitin carboxyl-terminal hydrolase 6/32.
   
 0.592
USP15
Ubiquitin carboxyl-terminal hydrolase 15.
   
 0.592
ASB6
Ankyrin repeat and SOCS box containing 6.
    
 
 0.556
ST8SIA1
Alpha-N-acetyl-neuraminate alpha-2,8-sialyltransferase (sialyltransferase 8A).
    
 
 0.543
TCF25
LOW QUALITY PROTEIN: transcription factor 25.
      
 0.535
CLCN3
H(+)/Cl(-) exchange transporter 3 isoform X1.
      
 0.531
Your Current Organism:
Athene cunicularia
NCBI taxonomy Id: 194338
Other names: A. cunicularia, Speotyto cunicularia, burrowing owl
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