STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSACUP00000011801annotation not available (279 aa)    
Predicted Functional Partners:
COL11A1
Collagen type V/XI/XXIV/XXVII, alpha.
 
      0.899
COL5A1
Collagen type V/XI/XXIV/XXVII, alpha.
 
      0.899
COL4A3
Collagen type IV alpha 3 chain.
 
  
  0.885
COL10A1
Collagen alpha-1(X) chain.
 
  
  0.879
COL5A2
Collagen alpha-2(V) chain isoform X1.
 
   
 0.724
COL16A1
Collagen alpha-1(XVI) chain.
 
 
  0.606
COL9A2
Collagen alpha-2(IX) chain.
 
 
  0.571
COL1A2
Collagen alpha-2(I) chain.
 
 
 
 0.563
COL4A1
Collagen alpha-1(IV) chain.
 
  
  0.550
COL4A5
Collagen alpha-5(IV) chain isoform X1.
 
  
  0.491
Your Current Organism:
Athene cunicularia
NCBI taxonomy Id: 194338
Other names: A. cunicularia, Speotyto cunicularia, burrowing owl
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.