STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NPHP1Nephrocystin-1 isoform X1. (630 aa)    
Predicted Functional Partners:
NPHP4
Nephrocystin 4.
   
 0.971
RPGRIP1L
Protein fantom isoform X1.
    
 0.942
MALL
MAL-like protein isoform X1.
 
    
 0.851
CEP290
Centrosomal protein 290.
   
 0.838
TMEM67
Meckelin.
   
  
 0.838
AHI1
Jouberin isoform X1.
    
 0.834
MKS1
MKS transition zone complex subunit 1.
   
 
 0.817
CC2D2A
Coiled-coil and C2 domain-containing protein 2A isoform X1.
   
  
 0.803
IQCB1
IQ motif containing B1.
    
 0.802
NPHP3
Nephrocystin-3 isoform X1.
    
 0.784
Your Current Organism:
Athene cunicularia
NCBI taxonomy Id: 194338
Other names: A. cunicularia, Speotyto cunicularia, burrowing owl
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.