STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALKBH4LOW QUALITY PROTEIN: alpha-ketoglutarate-dependent dioxygenase alkB homolog 4. (312 aa)    
Predicted Functional Partners:
METTL4
Methyltransferase-like protein 4 isoform X1.
      
 0.658
ALKBH1
alkB homolog 1, histone H2A dioxygenase.
   
  
 0.641
MED28
Mediator of RNA polymerase II transcription subunit 28.
      
 0.590
JMJD4
JmjC domain-containing protein 4.
   
  
 0.555
N6AMT1
Release factor glutamine methyltransferase.
      
 0.538
D2HGDH
D-2-hydroxyglutarate dehydrogenase, mitochondrial isoform X1.
      
 0.532
ALKBH2
DNA oxidative demethylase ALKBH2 isoform X1.
      
 0.532
SYCP1
Synaptonemal complex protein 1.
      
 0.531
ALKBH8
Alkylated DNA repair protein alkB homolog 8 isoform X1.
   
  
 0.476
KLHL31
Kelch-like protein 31.
   
  
 0.474
Your Current Organism:
Athene cunicularia
NCBI taxonomy Id: 194338
Other names: A. cunicularia, Speotyto cunicularia, burrowing owl
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.