STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TNRC6BTrinucleotide repeat-containing gene 6B protein isoform X1. (1084 aa)    
Predicted Functional Partners:
ENSACUP00000013991
annotation not available
 
     0.922
DDX6
Probable ATP-dependent RNA helicase DDX6.
    
 0.733
DICER1
Endoribonuclease Dicer.
     
 0.715
CNOT1
CCR4-NOT transcription complex subunit 1 isoform X1.
    
 
 0.694
ENSACUP00000022119
RISC-loading complex subunit TARBP2-like.
     
 0.587
AGO2
Eukaryotic translation initiation factor 2C.
    
 0.579
AGO3
Eukaryotic translation initiation factor 2C.
    
 0.579
AGO1
Eukaryotic translation initiation factor 2C.
    
 0.579
AGO4
Eukaryotic translation initiation factor 2C.
    
 0.579
DCP2
M7GpppN-mRNA hydrolase isoform X1.
    
 0.579
Your Current Organism:
Athene cunicularia
NCBI taxonomy Id: 194338
Other names: A. cunicularia, Speotyto cunicularia, burrowing owl
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.