STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
VTI1AVesicle transport through interaction with t-SNAREs homolog 1A. (214 aa)    
Predicted Functional Partners:
VAMP4
Vesicle-associated membrane protein 4.
   
 0.999
STX6
Syntaxin 6.
   
 0.999
YKT6
Synaptobrevin homolog YKT6.
    
 0.999
STX8
Syntaxin 8.
   
 0.998
NAPB
Beta-soluble NSF attachment protein.
    
 0.997
STX16
Syntaxin 16.
   
 0.997
VTI1B
Vesicle transport through interaction with t-SNAREs homolog 1B.
    
0.993
STX7
Syntaxin 7.
   
 0.992
VPS45
Vacuolar protein sorting 45 homolog.
   
 0.979
SEC22B
Vesicle-trafficking protein SEC22b.
   
 0.977
Your Current Organism:
Athene cunicularia
NCBI taxonomy Id: 194338
Other names: A. cunicularia, Speotyto cunicularia, burrowing owl
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.