STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LLPHProtein LLP homolog. (131 aa)    
Predicted Functional Partners:
CCDC59
Coiled-coil domain containing 59.
   
    0.773
ZNF593
Bud site selection protein 20.
   
 
 0.703
RPL30
Large subunit ribosomal protein L30e.
    
   0.696
NMD3
Nonsense-mediated mRNA decay protein 3.
   
 
 0.613
ENSACUP00000012987
annotation not available
   
    0.609
RSL24D1
Probable ribosome biogenesis protein RLP24.
   
   0.604
GNL2
Nucleolar GTP-binding protein 2.
   
 
 0.600
RPL7A
Large subunit ribosomal protein L7Ae.
   
   0.591
EIF6
Eukaryotic translation initiation factor 6.
   
 
 0.582
GTPBP4
Nucleolar GTP-binding protein 1.
   
 
 0.581
Your Current Organism:
Athene cunicularia
NCBI taxonomy Id: 194338
Other names: A. cunicularia, Speotyto cunicularia, burrowing owl
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