STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BUD23BUD23 rRNA methyltransferase and ribosome maturation factor. (239 aa)    
Predicted Functional Partners:
BYSL
Essential nuclear protein 1.
   
 0.978
LTV1
Protein LTV1 homolog.
   
 0.971
TSR1
Pre-rRNA-processing protein TSR1 homolog.
   
 0.970
TRMT11
TRNA (guanine(10)-N2)-methyltransferase homolog isoform X1.
   
 0.960
TRMT61A
TRNA (adenine57-N1/adenine58-N1)-methyltransferase catalytic subunit.
  
 0.954
RPS2
Small subunit ribosomal protein S2e.
    
 0.952
NOB1
NIN1 (RPN12) binding protein 1 homolog.
   
 0.951
WDR4
TRNA (guanine-N(7)-)-methyltransferase non-catalytic subunit WDR4.
   
 
 0.939
RPS23
Small subunit ribosomal protein S23e.
   
  0.939
RPS13
Small subunit ribosomal protein S13e.
    
  0.938
Your Current Organism:
Athene cunicularia
NCBI taxonomy Id: 194338
Other names: A. cunicularia, Speotyto cunicularia, burrowing owl
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.