STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SRGAP1SLIT-ROBO Rho GTPase-activating protein 1 isoform X1. (1024 aa)    
Predicted Functional Partners:
ENSACUP00000012979
annotation not available
   
 0.812
ITSN2
Intersectin-2 isoform X1.
   
0.812
WASL
Neural Wiskott-Aldrich syndrome protein isoform X1.
   
 0.677
ITSN1
Intersectin-1 isoform X1.
   
 0.671
GAS7
Growth arrest-specific protein 7 isoform X1.
    
 0.598
ENSACUP00000013835
annotation not available
      
 0.531
TSEN2
TRNA-splicing endonuclease subunit Sen2.
    
   0.520
CDC42
Cell division control protein 42 homolog isoform X1.
    
 0.480
NCKIPSD
NCK-interacting protein with SH3 domain.
    
 
 0.426
RHOU
Rho-related GTP-binding protein RhoU.
    
 0.420
Your Current Organism:
Athene cunicularia
NCBI taxonomy Id: 194338
Other names: A. cunicularia, Speotyto cunicularia, burrowing owl
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.