STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMAD5Mothers against decapentaplegic homolog 5. (465 aa)    
Predicted Functional Partners:
SMAD4
Mothers against decapentaplegic homolog 4.
   
0.995
SMAD9
Mothers against decapentaplegic homolog 9 isoform X1.
  
 
0.992
SMAD6
Mothers against decapentaplegic homolog 6.
   
0.979
SMAD7
Mothers against decapentaplegic homolog 7.
   
0.976
BMPR1A
Bone morphogenetic protein receptor type-1A.
   
 0.971
ACVR1
Activin receptor type-1 isoform X1.
   
 0.965
BMPR1B
Bone morphogenetic protein receptor type-1B isoform X1.
   
 0.965
SMAD1
Mothers against decapentaplegic homolog 1.
  
  
0.950
MAPK1
Mitogen-activated protein kinase 1/3.
   
 0.939
SMURF1
E3 ubiquitin-protein ligase SMURF1.
    
 0.865
Your Current Organism:
Athene cunicularia
NCBI taxonomy Id: 194338
Other names: A. cunicularia, Speotyto cunicularia, burrowing owl
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.