STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PGBD5PiggyBac transposable element-derived protein 5. (409 aa)    
Predicted Functional Partners:
CD3E
T-cell surface glycoprotein CD3 epsilon chain.
   
 0.767
THAP9
DNA transposase THAP9.
    
 0.657
CD247
CD247 molecule.
   
 0.643
QRICH1
Glutamine-rich protein 1.
   
 
 0.568
LOC113484757
[histone H3]-lysine36 N-dimethyltransferase SETMAR.
    
 0.565
RBM33
RNA binding motif protein 33.
   
 0.549
EED
Polycomb protein EED isoform X1.
    
 0.537
OXSM
3-oxoacyl-[acyl-carrier-protein] synthase, mitochondrial.
  
 0.522
RAG1
LOW QUALITY PROTEIN: V(D)J recombination-activating protein 1.
    
 0.498
ASF1A
Histone chaperone ASF1A.
    
 0.496
Your Current Organism:
Athene cunicularia
NCBI taxonomy Id: 194338
Other names: A. cunicularia, Speotyto cunicularia, burrowing owl
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.