STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SNAI1Zinc finger protein SNAI1. (234 aa)    
Predicted Functional Partners:
KDM1A
[histone H3]-N6,N6-dimethyl-L-lysine4 FAD-dependent demethylase.
    
 0.641
KPNB1
Importin subunit beta-1.
    
   0.525
RCOR1
REST corepressor 1.
    
 0.520
BTRC
F-box/WD repeat-containing protein 1A isoform X1.
    
 
 0.497
CDH1
Uncharacterized protein LOC113484597.
      
 0.468
GSK3B
Glycogen synthase kinase 3 beta.
   
 
 0.462
FBXL14
F-box and leucine-rich repeat protein 14.
   
 
 0.442
EOMES
Eomesodermin homolog.
    
 0.441
DNMT1
DNA methyltransferase 1.
    
 
 0.416
RCOR3
REST corepressor 3 isoform X1.
    
 0.409
Your Current Organism:
Athene cunicularia
NCBI taxonomy Id: 194338
Other names: A. cunicularia, Speotyto cunicularia, burrowing owl
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.