CPN2 protein (Athene cunicularia) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

CPN2

Uncharacterized protein LOC113483451. (542 aa)

Predicted Functional Partners:

GP9

0.732

ADGRL2

0.696

ADGRL3

0.696

ENSACUP00000018887

0.696

CPN1

0.688

LRRC18

0.510

LY96

0.463

GP1BA

0.448

ENSACUP00000022368

0.430

GP1BB

0.416

Your Current Organism:

Athene cunicularia

NCBI taxonomy Id: 194338
Other names: A. cunicularia, Speotyto cunicularia, burrowing owl

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ADGRL2	CPN2	ENSACUP00000010355	ENSACUP00000017700	Adhesion G protein-coupled receptor L2 isoform X1.	Uncharacterized protein LOC113483451.	0.696
ADGRL2	ENSACUP00000022368	ENSACUP00000010355	ENSACUP00000022368	Adhesion G protein-coupled receptor L2 isoform X1.	Leucine-rich repeat and fibronectin type III domain-containing protein 1-like protein isoform X1.	0.696
ADGRL2	GP1BA	ENSACUP00000010355	ENSACUP00000018724	Adhesion G protein-coupled receptor L2 isoform X1.	Platelet glycoprotein Ib alpha chain.	0.696
ADGRL2	GP1BB	ENSACUP00000010355	ENSACUP00000009811	Adhesion G protein-coupled receptor L2 isoform X1.	Platelet glycoprotein Ib beta chain.	0.696
ADGRL2	GP9	ENSACUP00000010355	ENSACUP00000012620	Adhesion G protein-coupled receptor L2 isoform X1.	Platelet glycoprotein IX.	0.696
ADGRL2	LRRC18	ENSACUP00000010355	ENSACUP00000004033	Adhesion G protein-coupled receptor L2 isoform X1.	Leucine-rich repeat-containing protein 18.	0.696
ADGRL3	CPN2	ENSACUP00000014701	ENSACUP00000017700	Adhesion G protein-coupled receptor L3 isoform X1.	Uncharacterized protein LOC113483451.	0.696
ADGRL3	ENSACUP00000022368	ENSACUP00000014701	ENSACUP00000022368	Adhesion G protein-coupled receptor L3 isoform X1.	Leucine-rich repeat and fibronectin type III domain-containing protein 1-like protein isoform X1.	0.696
ADGRL3	GP1BA	ENSACUP00000014701	ENSACUP00000018724	Adhesion G protein-coupled receptor L3 isoform X1.	Platelet glycoprotein Ib alpha chain.	0.696
ADGRL3	GP1BB	ENSACUP00000014701	ENSACUP00000009811	Adhesion G protein-coupled receptor L3 isoform X1.	Platelet glycoprotein Ib beta chain.	0.696
ADGRL3	GP9	ENSACUP00000014701	ENSACUP00000012620	Adhesion G protein-coupled receptor L3 isoform X1.	Platelet glycoprotein IX.	0.696
ADGRL3	LRRC18	ENSACUP00000014701	ENSACUP00000004033	Adhesion G protein-coupled receptor L3 isoform X1.	Leucine-rich repeat-containing protein 18.	0.696
CPN1	CPN2	ENSACUP00000008587	ENSACUP00000017700	Carboxypeptidase N catalytic subunit.	Uncharacterized protein LOC113483451.	0.688
CPN2	ADGRL2	ENSACUP00000017700	ENSACUP00000010355	Uncharacterized protein LOC113483451.	Adhesion G protein-coupled receptor L2 isoform X1.	0.696
CPN2	ADGRL3	ENSACUP00000017700	ENSACUP00000014701	Uncharacterized protein LOC113483451.	Adhesion G protein-coupled receptor L3 isoform X1.	0.696
CPN2	CPN1	ENSACUP00000017700	ENSACUP00000008587	Uncharacterized protein LOC113483451.	Carboxypeptidase N catalytic subunit.	0.688
CPN2	ENSACUP00000018887	ENSACUP00000017700	ENSACUP00000018887	Uncharacterized protein LOC113483451.	annotation not available	0.696
CPN2	ENSACUP00000022368	ENSACUP00000017700	ENSACUP00000022368	Uncharacterized protein LOC113483451.	Leucine-rich repeat and fibronectin type III domain-containing protein 1-like protein isoform X1.	0.430
CPN2	GP1BA	ENSACUP00000017700	ENSACUP00000018724	Uncharacterized protein LOC113483451.	Platelet glycoprotein Ib alpha chain.	0.448
CPN2	GP1BB	ENSACUP00000017700	ENSACUP00000009811	Uncharacterized protein LOC113483451.	Platelet glycoprotein Ib beta chain.	0.416