STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GTF3C5General transcription factor 3C polypeptide 5 (transcription factor C subunit 1). (338 aa)    
Predicted Functional Partners:
GTF3C3
General transcription factor 3C polypeptide 3 (transcription factor C subunit 4).
   
 0.997
GTF3C4
General transcription factor 3C polypeptide 4 isoform X1.
   
 0.970
GTF3C1
General transcription factor 3C polypeptide 1.
   
 0.966
BDP1
Transcription factor TFIIIB component B'' homolog.
    
 0.933
POGZ
Pogo transposable element derived with ZNF domain.
    
 0.876
BRF1
Transcription factor IIIB 90 kDa subunit.
    
 0.841
ENSACUP00000004049
annotation not available
    
 0.841
POLR3D
RNA polymerase III subunit D.
     
 0.803
POLR3G
DNA-directed RNA polymerase III subunit RPC7.
    
 0.801
POLR3A
DNA-directed RNA polymerase III subunit RPC1 isoform X1.
    
 0.799
Your Current Organism:
Athene cunicularia
NCBI taxonomy Id: 194338
Other names: A. cunicularia, Speotyto cunicularia, burrowing owl
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.