STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHBP1EH domain-binding protein 1 isoform X1. (1182 aa)    
Predicted Functional Partners:
PDLIM4
PDZ and LIM domain 4.
   
 0.879
PDLIM1
PDZ and LIM domain protein 1 isoform X1.
   
 0.861
SMTN
Smoothelin.
   
 
0.855
PDLIM3
PDZ and LIM domain 3.
   
 0.848
PDLIM5
PDZ and LIM domain protein 5 isoform X1.
   
 0.821
PDLIM7
PDZ and LIM domain 7.
   
 0.809
SMTNL2
Smoothelin-like protein 2 isoform X1.
   
 
0.779
LDB3
LIM domain binding 3.
    
 0.773
SPECC1L
Cytospin-A.
   
 
0.716
SPECC1
Cytospin-B isoform X1.
   
 
0.716
Your Current Organism:
Athene cunicularia
NCBI taxonomy Id: 194338
Other names: A. cunicularia, Speotyto cunicularia, burrowing owl
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.