STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LGI3Leucine-rich repeat LGI family member 3. (507 aa)    
Predicted Functional Partners:
ADAM22
Disintegrin and metalloproteinase domain-containing protein 22.
   
 
 0.706
ADAM23
Disintegrin and metalloproteinase domain-containing protein 23.
   
 
 0.693
CHMP7
Charged multivesicular body protein 7.
      
 0.536
MTUS1-2
Microtubule-associated tumor suppressor 1 isoform X1.
    
 
 0.472
ENSACUP00000006237
annotation not available
    
 
 0.472
FGF18
Fibroblast growth factor 18 isoform X1.
     
 0.472
MYSM1
Histone H2A deubiquitinase MYSM1 isoform X1.
    
 0.438
SEZ6
Seizure protein 6 homolog.
  
  0.420
SFTPC
Pulmonary surfactant-associated protein C isoform X1.
   
  
 0.418
Your Current Organism:
Athene cunicularia
NCBI taxonomy Id: 194338
Other names: A. cunicularia, Speotyto cunicularia, burrowing owl
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.