STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HAPLN1Hyaluronan and proteoglycan link protein 1. (355 aa)    
Predicted Functional Partners:
ACAN
Aggrecan core protein isoform X1.
   
0.891
DCX
Neuronal migration protein doublecortin isoform X1.
    
 
 0.538
MYSM1
Histone H2A deubiquitinase MYSM1 isoform X1.
    
 0.478
ARID4A
AT-rich interactive domain-containing protein 4A.
    
 0.465
ARID4B
AT-rich interactive domain-containing protein 4B.
    
 0.465
LUM
Lumican.
   
 0.418
EDIL3
EGF-like repeat and discoidin I-like domain-containing protein 3 isoform X1.
 
 
 0.415
PRDM5
PR/SET domain 5.
    
 0.409
Your Current Organism:
Athene cunicularia
NCBI taxonomy Id: 194338
Other names: A. cunicularia, Speotyto cunicularia, burrowing owl
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.