STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ROBO1Roundabout, axon guidance receptor 1. (1644 aa)    
Predicted Functional Partners:
SLIT2
Slit homolog 2 protein isoform X1.
   
 0.717
SLIT1
Slit homolog 1 protein.
   
 0.672
SLIT3
Slit guidance ligand 3.
   
 0.668
NYX
Nyctalopin isoform X1.
   
 0.617
LRIT3
Leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein 3.
    
 0.528
LRRC3
Leucine-rich repeat-containing protein 3.
   
 0.526
LRRC3B
Leucine-rich repeat-containing protein 3B.
   
 0.526
ENSACUP00000011598
annotation not available
   
 0.526
LRRC70
Leucine-rich repeat-containing protein 70.
   
 0.526
LRTM2
Leucine-rich repeat and transmembrane domain-containing protein 2.
   
 0.526
Your Current Organism:
Athene cunicularia
NCBI taxonomy Id: 194338
Other names: A. cunicularia, Speotyto cunicularia, burrowing owl
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.