STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LAPTM5Lysosomal-associated transmembrane protein 5. (258 aa)    
Predicted Functional Partners:
LAPTM4B
Lysosomal-associated transmembrane protein 4B.
     
0.909
LAPTM4A
Lysosomal-associated transmembrane protein 4A.
     
0.904
WDFY4
WD repeat- and FYVE domain-containing protein 4.
   
  
 0.539
ENSACUP00000004039
annotation not available
   
  
 0.539
PTPN6
Tyrosine-protein phosphatase non-receptor type 6 isoform X1.
   
  
 0.445
NCKAP1
Nck-associated protein 1 isoform X1.
   
  
 0.430
MYO1E
Unconventional myosin-Ie.
   
  
 0.404
SASH3
SAM and SH3 domain containing 3.
   
  
 0.404
MYO1F
Unconventional myosin-If.
   
  
 0.404
PTPRC
Receptor-type tyrosine-protein phosphatase C isoform X1.
   
    0.403
Your Current Organism:
Athene cunicularia
NCBI taxonomy Id: 194338
Other names: A. cunicularia, Speotyto cunicularia, burrowing owl
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.