STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABCA1ATP-binding cassette sub-family A member 1 isoform X1. (2261 aa)    
Predicted Functional Partners:
NR1H3
Oxysterols receptor LXR-alpha.
    
 0.667
RXRA
Retinoic acid receptor RXR-alpha.
    
 0.559
PRKACB
CAMP-dependent protein kinase catalytic subunit beta isoform X1.
   
 
  0.532
AP2B1
AP-2 complex subunit beta isoform X1.
      
 0.489
APOB
Apolipoprotein B-100.
      
 0.474
CD36
Platelet glycoprotein 4.
   
  
 0.449
SLC15A1
Solute carrier family 15 member 1.
    
 
 0.422
ZDHHC5
Zinc finger DHHC-type containing 5.
   
 
  0.420
ZDHHC8
Probable palmitoyltransferase ZDHHC8 isoform X1.
   
 
  0.420
AGPAT1
1-acyl-sn-glycerol-3-phosphate acyltransferase alpha.
   
 
 0.412
Your Current Organism:
Athene cunicularia
NCBI taxonomy Id: 194338
Other names: A. cunicularia, Speotyto cunicularia, burrowing owl
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.