STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DNMT1DNA methyltransferase 1. (1601 aa)    
Predicted Functional Partners:
USP7
Ubiquitin carboxyl-terminal hydrolase 7.
   
 
 0.945
EZH2
Histone-lysine N-methyltransferase EZH2 isoform X1.
   
 0.921
PCNA
Proliferating cell nuclear antigen.
   
   0.907
UHRF1
E3 ubiquitin-protein ligase UHRF1.
  
 0.907
UHRF2
Ubiquitin like with PHD and ring finger domains 2.
  
 0.903
ENSACUP00000000345
Histone H3-like.
    
 0.805
LOC113486933
Histone H3.3.
    
 0.805
LOC113475868
Histone H3.
    
 0.805
RPS27A
Ubiquitin-small subunit ribosomal protein S27Ae.
    
 
 0.795
TUBGCP5
Gamma-tubulin complex component 5.
   
 0.776
Your Current Organism:
Athene cunicularia
NCBI taxonomy Id: 194338
Other names: A. cunicularia, Speotyto cunicularia, burrowing owl
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.