STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OQR36642.1Lactoylglutathione lyase; Derived by automated computational analysis using gene prediction method: Protein Homology. (321 aa)    
Predicted Functional Partners:
OQR36643.1
enoyl-CoA hydratase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the enoyl-CoA hydratase/isomerase family.
    
  0.831
OQR36644.1
Short-chain dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
  0.764
OQR35583.1
Oxaloacetate decarboxylase subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.750
OQR36540.1
NADH oxidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
 0.735
OQR35733.1
CDP-6-deoxy-delta-3,4-glucoseen reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
 0.735
BWR59_23090
Hcp1 family type VI secretion system effector; Frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
 0.735
gloB
Lytic transglycosylase; Thiolesterase that catalyzes the hydrolysis of S-D-lactoyl- glutathione to form glutathione and D-lactic acid.
     
 0.714
OQR29659.1
Cystathionine beta-lyase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
  0.679
OQR28700.1
Sulfurtransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
  0.679
argA
Amino-acid N-acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.673
Your Current Organism:
Pseudomonas sp. Bch
NCBI taxonomy Id: 1943632
Other names: P. sp. Bc-h, Pseudomonas sp. Bc-h
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.