STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OQR29570.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (701 aa)    
Predicted Functional Partners:
OQR29571.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
     
 0.625
OQR29572.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.447
OQR28379.1
Type VI secretion protein ImpG; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.423
OQR26458.1
Type VI secretion protein ImpG; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.422
OQR28040.1
General secretion pathway protein GspM; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.414
OQR26459.1
Type VI secretion protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.414
OQR26457.1
Type VI secretion system ImpA domain-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.410
OQR30164.1
Type VI secretion system-associated protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.406
Your Current Organism:
Pseudomonas sp. Bch
NCBI taxonomy Id: 1943632
Other names: P. sp. Bc-h, Pseudomonas sp. Bc-h
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.