STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OQR29707.1Porin; Derived by automated computational analysis using gene prediction method: Protein Homology. (441 aa)    
Predicted Functional Partners:
OQR28950.1
Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
  0.703
OQR30545.1
Metal-chelation protein CHAD; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.690
OQR28949.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.663
OQR33604.1
Alginate biosynthesis protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.655
OQR33617.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.654
OQR31598.1
Cell division inhibitor SulA; Component of the SOS system and an inhibitor of cell division. Accumulation of SulA causes rapid cessation of cell division and the appearance of long, non-septate filaments. In the presence of GTP, binds a polymerization-competent form of FtsZ in a 1:1 ratio, thus inhibiting FtsZ polymerization and therefore preventing it from participating in the assembly of the Z ring. This mechanism prevents the premature segregation of damaged DNA to daughter cells during cell division.
  
     0.633
OQR33607.1
Alginate O-acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.618
OQR30562.1
DUF4892 domain-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.614
OQR37571.1
DNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.613
OQR31600.1
PasA protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.599
Your Current Organism:
Pseudomonas sp. Bch
NCBI taxonomy Id: 1943632
Other names: P. sp. Bc-h, Pseudomonas sp. Bc-h
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.