STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OOG43837.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (109 aa)    
Predicted Functional Partners:
OOG43839.1
Antibiotic biosynthesis monooxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.801
OOG43838.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.773
OOG43841.1
EamA family transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.754
OOG43840.1
Lysine transporter LysE; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.752
OOG43842.1
Lysine transporter LysE; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.752
OOG43836.1
AraC family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.623
OOG43835.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.592
OOG43843.1
GntR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.523
metG
methionine--tRNA ligase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation.
    
  0.501
OOG39840.1
Catalase HPII; Serves to protect cells from the toxic effects of hydrogen peroxide.
    
  0.488
Your Current Organism:
Polaromonas sp. A23
NCBI taxonomy Id: 1944133
Other names: P. sp. A23
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.