STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CT1286Multidrug resistance protein, FusA/NodT family; Identified by similarity to EGAD:17129; match to protein family HMM PF02321; match to protein family HMM TIGR01845. (475 aa)    
Predicted Functional Partners:
CT1287
Multidrug resistance protein, AcrB/AcrD family; Identified by similarity to EGAD:20941; match to protein family HMM PF00873; match to protein family HMM TIGR00915; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
 
 0.996
CT1288
Multidrug resistance protein, AcrA/AcrE family; Identified by similarity to EGAD:19682; match to protein family HMM PF00529; match to protein family HMM TIGR01730; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 0.961
emrA
Identified by similarity to EGAD:20365; match to protein family HMM PF00529.
 
 
 0.857
CT1285
Hypothetical protein; Identified by Glimmer2; putative.
       0.741
CT0553
ABC-type export system, membrane fusion protein; Identified by similarity to EGAD:18526; match to protein family HMM PF00529.
 
 
 0.713
macB
ABC transporter, ATP-binding protein; Non-canonical ABC transporter that contains transmembrane domains (TMD), which form a pore in the inner membrane, and an ATP- binding domain (NBD), which is responsible for energy generation. Confers resistance against macrolides.
 
 0.655
CT1348
Membrane fusion efflux protein, putative; Identified by similarity to EGAD:91761; match to protein family HMM PF00529; match to protein family HMM TIGR01730; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 
 0.654
CT1284
Hypothetical protein; Identified by Glimmer2; putative.
       0.504
ogt
methylated-DNA--protein-cysteine methyltransferase; Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction: the enzyme is irreversibly inactivated.
       0.475
CT0104
Multidrug resistance protein; Identified by similarity to EGAD:19655; match to protein family HMM PF07690; match to protein family HMM TIGR00711; Belongs to the major facilitator superfamily.
  
  
 0.466
Your Current Organism:
Chlorobaculum tepidum
NCBI taxonomy Id: 194439
Other names: C. tepidum TLS, Chlorobaculum tepidum TLS, Chlorobium tepidum TLS
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