STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CT1598Hypothetical protein; Identified by Glimmer2; putative. (271 aa)    
Predicted Functional Partners:
CT1599
Hypothetical protein; Identified by Glimmer2; putative.
     0.989
CT0361
Membrane protein, putative; Identified by similarity to EGAD:158971; match to protein family HMM TIGR00374.
  
     0.719
CT1571
Hypothetical protein; Identified by Glimmer2; putative.
  
     0.694
CT0208
Hypothetical protein; Identified by Glimmer2; putative.
  
     0.674
CT1569
Hypothetical protein; Identified by Glimmer2; putative.
  
     0.664
CT1721
Hypothetical protein; Identified by Glimmer2; putative.
  
     0.599
CT1225
N-acetylmuramoyl-L-alanine amidase, putative; Identified by similarity to GP:1127790; match to protein family HMM PF01510.
  
     0.540
CT2111
Conserved hypothetical protein; Identified by similarity to EGAD:164426; match to protein family HMM PF02620.
  
     0.510
csmI
Chlorosome envelope protein I; Could play a direct role in the oxidation or reduction of the quenching species formed in the chlorosome.
  
     0.501
csmX
Chlorosome envelope protein X; Identified by similarity to GP:3089164; match to protein family HMM PF00111.
  
     0.484
Your Current Organism:
Chlorobaculum tepidum
NCBI taxonomy Id: 194439
Other names: C. tepidum TLS, Chlorobaculum tepidum TLS, Chlorobium tepidum TLS
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.