STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cydDABC transporter, ATP-binding protein CydD; Identified by similarity to EGAD:18559; match to protein family HMM PF00005; match to protein family HMM PF00664. (580 aa)    
Predicted Functional Partners:
cydC
ABC transporter, ATP-binding protein CydC; Identified by similarity to EGAD:19757; match to protein family HMM PF00005.
 
 
0.998
cydB
Cytochrome d ubiquinol oxidase, subunit II; Identified by similarity to EGAD:15418; match to protein family HMM PF02322; match to protein family HMM TIGR00203.
 
  
 0.995
cydA
Cytochrome d ubiquinol oxidase, subunit I; Identified by similarity to EGAD:15777; match to protein family HMM PF01654; Belongs to the cytochrome ubiquinol oxidase subunit 1 family.
  
 0.993
pstB
Phosphate ABC transporter, ATP-binding protein; Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphate importer (TC 3.A.1.7) family.
 
     
0.900
CT0326
ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005.
 
   
0.842
CT1820
Hypothetical protein; Identified by Glimmer2; putative.
       0.773
CT0953
ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005.
 
     
0.756
cbiO
Cobalt transport protein; Probably part of an ABC transporter complex. Responsible for energy coupling to the transport system (By similarity).
    
0.478
dnaK
dnaK protein; Acts as a chaperone; Belongs to the heat shock protein 70 family.
  
     0.459
Your Current Organism:
Chlorobaculum tepidum
NCBI taxonomy Id: 194439
Other names: C. tepidum TLS, Chlorobaculum tepidum TLS, Chlorobium tepidum TLS
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.