STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CT1897Conserved hypothetical protein; Identified by similarity to EGAD:44350; match to protein family HMM PF00924. (347 aa)    
Predicted Functional Partners:
cafA
Ribonuclease G; Identified by similarity to SP:P25537; match to protein family HMM PF00575; match to protein family HMM TIGR00757.
 
  
   0.691
CT1359
Conserved hypothetical protein; Identified by similarity to GP:4757095; match to protein family HMM PF00723.
  
     0.636
purF
Amidophosphoribosyltransferase; Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine.
 
      0.553
CT0481
Membrane protein, putative; Identified by similarity to EGAD:109216; match to protein family HMM PF01914; match to protein family HMM TIGR00427.
 
    0.505
CT1898
Protoporphyrinogen oxidase, putative; Identified by similarity to EGAD:139895; match to protein family HMM PF07992.
       0.486
CT1896
Peptidyl-prolyl cis-trans isomerase, FKBP-type; Identified by similarity to GP:4126414; match to protein family HMM PF00254.
       0.450
Your Current Organism:
Chlorobaculum tepidum
NCBI taxonomy Id: 194439
Other names: C. tepidum TLS, Chlorobaculum tepidum TLS, Chlorobium tepidum TLS
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.