STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OOG51543.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (600 aa)    
Predicted Functional Partners:
OOG45483.1
TonB-dependent receptor; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.542
OOG51542.1
Membrane dipeptidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.528
OOG46029.1
LPS export ABC transporter periplasmic protein LptC; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.524
OOG51325.1
TonB-dependent receptor; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.522
OOG51544.1
Transferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.519
OOG45455.1
TonB-dependent receptor; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.513
OOG50894.1
TonB-dependent receptor; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.500
OOG45906.1
Peptidase M61; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.486
OOG48763.1
Peptidase M61; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.480
OOG49059.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.472
Your Current Organism:
Rhodanobacter sp. C01
NCBI taxonomy Id: 1945856
Other names: R. sp. C01
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.