STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OOG49208.1TonB-dependent receptor; Derived by automated computational analysis using gene prediction method: Protein Homology. (1067 aa)    
Predicted Functional Partners:
OOG49830.1
Tryptophan halogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.776
OOG46032.1
Tryptophan halogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.772
OOG47130.1
Tryptophan halogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.768
OOG47092.1
Transcription factor; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.767
OOG45536.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
     0.724
OOG46031.1
1,4-beta-D-glucan glucohydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.674
OOG45552.1
Multidrug transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.648
OOG49210.1
LacI family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.641
OOG49165.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.636
OOG46072.1
Methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.617
Your Current Organism:
Rhodanobacter sp. C01
NCBI taxonomy Id: 1945856
Other names: R. sp. C01
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.