STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OOG52376.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (663 aa)    
Predicted Functional Partners:
OOG57795.1
Dipeptidyl aminopeptidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.704
OOG60902.1
Protease; Degrades oligopeptides; Belongs to the peptidase S41B family.
  
     0.536
OOG57865.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.498
OOG52890.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.497
OOG58555.1
Hypothetical protein; Degrades oligopeptides; Belongs to the peptidase S41B family.
  
     0.489
OOG53835.1
Hypothetical protein; Degrades oligopeptides; Belongs to the peptidase S41B family.
  
     0.472
OOG60569.1
Amidohydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.432
OOG52641.1
Aminopeptidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.416
Your Current Organism:
Rhodanobacter sp. B05
NCBI taxonomy Id: 1945859
Other names: R. sp. B05
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.