STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SKC40884.1Hypothetical protein. (339 aa)    
Predicted Functional Partners:
SKC40892.1
Protein of unknown function.
       0.773
SKC40868.1
Fimbrillin-like.
       0.648
SKC40879.1
Fimbrillin-like.
       0.648
SKC40843.1
Hypothetical protein.
       0.515
SKC40849.1
Fimbrillin-like.
       0.515
SKC40865.1
Fimbrillin-like.
       0.515
SKC40824.1
Fimbrillin-like.
       0.467
SKC40830.1
Hypothetical protein.
       0.467
SKC40835.1
Protein of unknown function.
       0.467
SKC40809.1
Hypothetical protein.
       0.441
Your Current Organism:
Bacteroidales bacterium WCE2004
NCBI taxonomy Id: 1945890
Other names: B. bacterium WCE2004
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.