STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SKC59986.1MFS transporter, SP family, xylose:H+ symportor; Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family. (491 aa)    
Predicted Functional Partners:
SKC40452.1
Glyceraldehyde 3-phosphate dehydrogenase; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family.
    
 0.688
SKC41247.1
Para-nitrobenzyl esterase; Belongs to the type-B carboxylesterase/lipase family.
   
 
 0.631
tdk
Thymidine kinase.
    
  0.619
SKC43946.1
Phosphoenolpyruvate mutase.
   
 0.610
gpmI
Phosphoglycerate mutase; Catalyzes the interconversion of 2-phosphoglycerate and 3- phosphoglycerate.
    
  0.606
asd
Aspartate-semialdehyde dehydrogenase; Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L-aspartyl- 4-phosphate; Belongs to the aspartate-semialdehyde dehydrogenase family.
   
  0.593
SKC47061.1
Aspartate kinase.
   
  0.584
SKC60002.1
Hypothetical protein.
       0.558
SKC59670.1
MFS transporter, ACS family, hexuronate transporter.
  
  
 0.550
SKC35073.1
Acetylornithine aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
  
 
 0.520
Your Current Organism:
Bacteroidales bacterium WCE2008
NCBI taxonomy Id: 1945891
Other names: B. bacterium WCE2008
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.