STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APG89355.1Nitroreductase family protein. (274 aa)    
Predicted Functional Partners:
APG89436.1
ABC transporter; Region:COG0842V.
  
  
 0.586
APG91404.1
Inner membrane transport permease YadH; Region:COG0842V.
  
  
 0.586
gabD
Succinate-semialdehyde dehydrogenase [NADP+]; Region:COG1012C; Belongs to the aldehyde dehydrogenase family.
  
  
 0.575
APG91656.1
TPR domain-containing protein.
  
  
 0.567
APG91835.1
Hypothetical protein; Region:COG1944J.
  
  
 0.567
ribB
Riboflavin biosynthesis protein RibBA; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; Belongs to the DHBP synthase family.
  
 
 0.500
cysG
Siroheme synthase; Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD-dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme.
  
  
 0.482
fadD
long-chain-fatty-acid--CoA ligase FadD; Region:COG0318IQ.
   
 
 0.443
APG90257.1
long-chain-fatty-acid--CoA ligase; Region:COG0318IQ.
   
 
 0.443
lcfB
long-chain-fatty-acid--CoA ligase LcfB; Region:COG0318IQ.
   
 
 0.443
Your Current Organism:
Sinorhizobium americanum
NCBI taxonomy Id: 194963
Other names: ATCC BAA-532, CIP 108390, DSM 15007, Ensifer americanum, Ensifer americanus, Ensifer americanus corrig. (Toledo et al. 2003) Wang et al. 2015, Ensifer sp. AC14c, Ensifer sp. CFNEI 156, S. americanum, Sinorhizobium americanum Toledo et al. 2004, Sinorhizobium americanus, Sinorhizobium sp. CFNEI 156, Sinorhizobium sp. CFNEI 54, strain CFNEI 156
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