STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APG89383.1Phosphotransferase system, phosphocarrier HPr protein; Region:COG1925TG. (96 aa)    
Predicted Functional Partners:
APG89384.1
PTS system fructose transporter subunit IIA; Region:COG2893G.
 
 0.997
ptsP
Phosphoenolpyruvate-protein phosphotransferase PtsP; Region:COG3605T; Belongs to the PEP-utilizing enzyme family.
  
 
 
 0.963
rpsG
30S ribosomal protein S7; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA; Belongs to the universal ribosomal protein uS7 family.
  
    0.802
ptsN
Nitrogen regulatory protein PtsN; Region:COG1762GT.
 
  
 0.793
APG89385.1
Hypothetical protein; Region:COG1493T.
 
 
 
 0.771
purR
HTH-type transcriptional repressor PurR; Region:COG1609K.
 
 
 
 0.713
APG91403.1
LacI family transcriptional regulator; Region:COG1609K.
 
 
 
 0.713
aglR
HTH-type transcriptional regulator AglR; Region:COG1609K.
 
 
 
 0.700
purR-2
HTH-type transcriptional repressor PurR; Region:COG1609K.
 
 
 
 0.699
aglR-3
HTH-type transcriptional regulator AglR; Region:COG1609K.
 
 
 
 0.698
Your Current Organism:
Sinorhizobium americanum
NCBI taxonomy Id: 194963
Other names: ATCC BAA-532, CIP 108390, DSM 15007, Ensifer americanum, Ensifer americanus, Ensifer americanus corrig. (Toledo et al. 2003) Wang et al. 2015, Ensifer sp. AC14c, Ensifer sp. CFNEI 156, S. americanum, Sinorhizobium americanum Toledo et al. 2004, Sinorhizobium americanus, Sinorhizobium sp. CFNEI 156, Sinorhizobium sp. CFNEI 54, strain CFNEI 156
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