STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cypEBifunctional reductase 2; Region:COG2124QV; Belongs to the cytochrome P450 family. (468 aa)    
Predicted Functional Partners:
APG89897.1
Erythronolide synthase, modules 3 and 4; Region:COG0236IQ.
 
 0.961
polA
DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family.
    
 0.907
rplF
50S ribosomal protein L6; This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center; Belongs to the universal ribosomal protein uL6 family.
    
  0.824
APG92946.1
Phosphatidic acid phosphatase type 2; Region:COG0671I.
   
 0.769
APG90060.1
Dioxygenase reductase subunit; Region:COG1018C.
  
 0.747
hcr
NADH oxidoreductase Hcr; Region:COG1018C.
  
 0.747
paaE
Phenylacetic acid degradation NADH oxidoreductase PaaE; Region:COG1018C.
  
 0.747
cya-19
Adenylate cyclase; Region:COG0633C.
  
 0.714
APG90682.1
Metallophosphoesterase YhaO; Region:COG0420L.
    
 0.702
fadD
long-chain-fatty-acid--CoA ligase FadD; Region:COG0318IQ.
  
 0.701
Your Current Organism:
Sinorhizobium americanum
NCBI taxonomy Id: 194963
Other names: ATCC BAA-532, CIP 108390, DSM 15007, Ensifer americanum, Ensifer americanus, Ensifer americanus corrig. (Toledo et al. 2003) Wang et al. 2015, Ensifer sp. AC14c, Ensifer sp. CFNEI 156, S. americanum, Sinorhizobium americanum Toledo et al. 2004, Sinorhizobium americanus, Sinorhizobium sp. CFNEI 156, Sinorhizobium sp. CFNEI 54, strain CFNEI 156
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