STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
regBSensor histidine kinase RegB; Region:COG0642T. (429 aa)    
Predicted Functional Partners:
actR
Acid tolerance regulatory protein ActR; Region:COG4567TK.
 
 0.993
APG92835.1
Transcriptional regulatory protein YvrH; Region:COG0745TK.
 
 
 0.740
APG89906.1
Hypothetical protein.
  
     0.730
APG92857.1
Hypothetical protein.
  
     0.679
APG89793.1
Two component sensor histidine kinase protein; Region:COG4191T.
  
     0.660
APG90173.1
Two-component sensor histidine kinase protein; Region:COG0784T.
   
 
 0.586
hrpB
ATP-dependent RNA helicase HrpB; Region:COG1643J.
  
 
 0.565
phoB
Phosphate regulon transcriptional regulatory protein PhoB; Region:COG0745TK.
 
 
 0.565
APG89410.1
ABC transporter ATP-binding protein YnjD; Region:COG4136R.
       0.525
APG89411.1
Binding-protein-dependent transport system inner membrane protein; Region:COG4135R.
       0.525
Your Current Organism:
Sinorhizobium americanum
NCBI taxonomy Id: 194963
Other names: ATCC BAA-532, CIP 108390, DSM 15007, Ensifer americanum, Ensifer americanus, Ensifer americanus corrig. (Toledo et al. 2003) Wang et al. 2015, Ensifer sp. AC14c, Ensifer sp. CFNEI 156, S. americanum, Sinorhizobium americanum Toledo et al. 2004, Sinorhizobium americanus, Sinorhizobium sp. CFNEI 156, Sinorhizobium sp. CFNEI 54, strain CFNEI 156
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.