STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pheAPrephenate dehydratase; Region:COG0077E. (284 aa)    
Predicted Functional Partners:
aatA
Aspartate aminotransferase A; Region:COG0436E.
 
 
 0.985
aatB
Aspartate aminotransferase B; Region:COG0436E.
 
 
 0.974
tyrC
Cyclohexadienyl dehydrogenase; Region:COG0287E.
 
 0.968
tatA
Tyrosine aminotransferase TatA; Region:COG1448E.
    
 0.936
hisC-2
Histidinol-phosphate aminotransferase; Region:COG0079E; Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily.
 
 
 0.928
APG92875.1
Chorismate mutase; Region:COG1605E.
  
 
 0.923
hisC
Histidinol-phosphate aminotransferase; Region:COG0079E.
  
 
 0.921
hisC-3
Histidinol-phosphate aminotransferase; Region:COG0079E; Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily.
  
 
 0.919
kdsA
2-dehydro-3-deoxyphosphooctonate aldolase; Region:COG2877M; Belongs to the KdsA family.
 
 
  
 0.884
APG89698.1
acyl-CoA N-acyltransferase, GNAT family protein; Region:COG1670JO.
    
  0.800
Your Current Organism:
Sinorhizobium americanum
NCBI taxonomy Id: 194963
Other names: ATCC BAA-532, CIP 108390, DSM 15007, Ensifer americanum, Ensifer americanus, Ensifer americanus corrig. (Toledo et al. 2003) Wang et al. 2015, Ensifer sp. AC14c, Ensifer sp. CFNEI 156, S. americanum, Sinorhizobium americanum Toledo et al. 2004, Sinorhizobium americanus, Sinorhizobium sp. CFNEI 156, Sinorhizobium sp. CFNEI 54, strain CFNEI 156
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