STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APG89515.1BadF/BadG/BcrA/BcrD type ATPase; Region:COG2971G. (294 aa)    
Predicted Functional Partners:
nagA
N-acetylglucosamine-6-phosphate deacetylase NagA; Region:COG1820G.
 
  
 0.991
glmS
Glucosamine--fructose-6-phosphate aminotransferase; Region:COG2222M.
 
  
 0.977
glmS-2
Glucosamine--fructose-6-phosphate aminotransferase; Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source.
  
 
 0.933
APG89516.1
HTH-type transcriptional repressor YvoA; Region:COG2188K.
 
     0.917
glmM
Phosphoglucosamine mutase; Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate; Belongs to the phosphohexose mutase family.
   
 
 0.917
murQ
N-acetylmuramic acid 6-phosphate etherase MurQ; Region:COG2103M.
  
 0.866
APG89513.1
Family 1 extracellular solute-binding protein; Region:COG1653G.
 
    0.769
APG89512.1
ABC transporter permease YurN; Region:COG1175G.
 
     0.604
APG89511.1
ABC transporter permease; Region:COG0395G.
 
     0.587
APG89510.1
Oxidoreductase, Gfo/Idh/MocA family; Region:COG0673R.
 
    0.525
Your Current Organism:
Sinorhizobium americanum
NCBI taxonomy Id: 194963
Other names: ATCC BAA-532, CIP 108390, DSM 15007, Ensifer americanum, Ensifer americanus, Ensifer americanus corrig. (Toledo et al. 2003) Wang et al. 2015, Ensifer sp. AC14c, Ensifer sp. CFNEI 156, S. americanum, Sinorhizobium americanum Toledo et al. 2004, Sinorhizobium americanus, Sinorhizobium sp. CFNEI 156, Sinorhizobium sp. CFNEI 54, strain CFNEI 156
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