STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APG89516.1HTH-type transcriptional repressor YvoA; Region:COG2188K. (254 aa)    
Predicted Functional Partners:
APG89515.1
BadF/BadG/BcrA/BcrD type ATPase; Region:COG2971G.
 
     0.917
glmS
Glucosamine--fructose-6-phosphate aminotransferase; Region:COG2222M.
 
  
 0.900
nagA
N-acetylglucosamine-6-phosphate deacetylase NagA; Region:COG1820G.
 
  
 0.893
APG89513.1
Family 1 extracellular solute-binding protein; Region:COG1653G.
 
 
   0.856
APG89512.1
ABC transporter permease YurN; Region:COG1175G.
 
    0.762
APG89511.1
ABC transporter permease; Region:COG0395G.
 
    0.750
APG89510.1
Oxidoreductase, Gfo/Idh/MocA family; Region:COG0673R.
 
    0.743
murQ
N-acetylmuramic acid 6-phosphate etherase MurQ; Region:COG2103M.
 
     0.735
APG90225.1
AraC-family transcriptional regulator; Region:COG1917R.
  
  
 0.631
guaA
GMP synthase; Catalyzes the synthesis of GMP from XMP.
     
 0.500
Your Current Organism:
Sinorhizobium americanum
NCBI taxonomy Id: 194963
Other names: ATCC BAA-532, CIP 108390, DSM 15007, Ensifer americanum, Ensifer americanus, Ensifer americanus corrig. (Toledo et al. 2003) Wang et al. 2015, Ensifer sp. AC14c, Ensifer sp. CFNEI 156, S. americanum, Sinorhizobium americanum Toledo et al. 2004, Sinorhizobium americanus, Sinorhizobium sp. CFNEI 156, Sinorhizobium sp. CFNEI 54, strain CFNEI 156
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