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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APG89547.1NlpC/P60 family protein; Region:COG0791M. (283 aa)    
Predicted Functional Partners:
APG89548.1
MarR family transcriptional regulator; Region:COG1846K.
       0.800
APG90971.1
Lipoprotein YgeR; Region:COG1388M.
 
  
 0.640
APG91165.1
Phage protein.
  
  
 0.552
pepA
Cytosol aminopeptidase PepA; Region:COG0260E; Belongs to the peptidase M17 family.
       0.545
murD
UDP-N-acetylmuramoylalanine--D-glutamate ligase MurD; Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA). Belongs to the MurCDEF family.
 
   
 0.499
APG91161.1
Hypothetical protein.
  
    0.494
APG92857.1
Hypothetical protein.
  
     0.486
APG89858.1
Peptidoglycan-binding protein.
     
 0.481
APG89550.1
Flp pilus assembly protein TadD, contains TPR repeat; Region:COG5010UW.
  
   0.472
APG89725.1
Organic solvent tolerance protein; Region:COG1934M.
  
    0.465
Your Current Organism:
Sinorhizobium americanum
NCBI taxonomy Id: 194963
Other names: ATCC BAA-532, CIP 108390, DSM 15007, Ensifer americanum, Ensifer americanus, Ensifer americanus corrig. (Toledo et al. 2003) Wang et al. 2015, Ensifer sp. AC14c, Ensifer sp. CFNEI 156, S. americanum, Sinorhizobium americanum Toledo et al. 2004, Sinorhizobium americanus, Sinorhizobium sp. CFNEI 156, Sinorhizobium sp. CFNEI 54, strain CFNEI 156
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