Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
APG89648.1Iron-regulated protein A precursor; Region:COG3487S. (426 aa)    
Predicted Functional Partners:
APG89647.1
Thiol oxidoreductase with 2 cytochrome c heme-binding site; Region:COG3488R.
 
    0.978
APG89646.1
Iron-regulated protein A precursor; Region:COG3489S.
 
    0.956
futA
Iron uptake protein A1; Region:COG1840P.
  
    0.899
APG89643.1
Exported protein; Region:COG3490S.
 
    0.844
APG90336.1
Additional periplasmic component NikK of nickel ECF transporter; Region:COG5266R.
   
    0.779
APG90567.1
Multicopper oxidase; Region:COG2132DPM.
 
     0.604
rsmB
Ribosomal RNA small subunit methyltransferase B; Region:COG0144J; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family.
       0.563
APG90053.1
ABC transporter permease; Region:COG1178P.
 
    0.409
Your Current Organism:
Sinorhizobium americanum
NCBI taxonomy Id: 194963
Other names: ATCC BAA-532, CIP 108390, DSM 15007, Ensifer americanum, Ensifer americanus, Ensifer americanus corrig. (Toledo et al. 2003) Wang et al. 2015, Ensifer sp. AC14c, Ensifer sp. CFNEI 156, S. americanum, Sinorhizobium americanum Toledo et al. 2004, Sinorhizobium americanus, Sinorhizobium sp. CFNEI 156, Sinorhizobium sp. CFNEI 54, strain CFNEI 156
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