Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
APG89729.1Permeases of the major facilitator superfamily. (113 aa)    
Predicted Functional Partners:
fliJ
Flagellar protein FliJ.
  
     0.723
APG90913.1
Zinc-finger domain protein; Region:COG4391S.
  
     0.713
APG90856.1
Hypothetical protein.
  
     0.694
APG90276.1
Invasion associated locus B; Region:COG5342R.
  
     0.689
ihfB
Integration host factor subunit beta; This protein is one of the two subunits of integration host factor, a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control. Belongs to the bacterial histone-like protein family.
       0.645
APG89867.1
Hypothetical protein.
  
     0.645
APG90585.1
Transmembrane protein; Region:COG1714S.
  
     0.629
APG90485.1
Hypothetical protein.
  
     0.598
APG90398.1
Hypothetical protein; Region:COG5402S.
  
     0.597
APG90657.1
Hypothetical protein.
  
     0.591
Your Current Organism:
Sinorhizobium americanum
NCBI taxonomy Id: 194963
Other names: ATCC BAA-532, CIP 108390, DSM 15007, Ensifer americanum, Ensifer americanus, Ensifer americanus corrig. (Toledo et al. 2003) Wang et al. 2015, Ensifer sp. AC14c, Ensifer sp. CFNEI 156, S. americanum, Sinorhizobium americanum Toledo et al. 2004, Sinorhizobium americanus, Sinorhizobium sp. CFNEI 156, Sinorhizobium sp. CFNEI 54, strain CFNEI 156
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