STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
bepEEfflux pump membrane transporter BepE; Region:COG0841V. (1061 aa)    
Predicted Functional Partners:
bepF
Efflux pump periplasmic linker BepF; Region:COG0845MV; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 
 0.925
bepF-2
Efflux pump periplasmic linker BepF; Region:COG0845MV; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 
 0.859
APG91616.1
RND family efflux transporter MFP subunit; Region:COG0845MV; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 
 0.858
APG92491.1
RND family efflux transporter MFP subunit; Region:COG0845MV; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 
 0.858
ttgA
Toluene efflux pump periplasmic linker protein TtgA; Region:COG0845MV; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 0.855
tolC
TolC outer membrane protein; Region:COG1538M.
 
 
 0.642
macA
Macrolide-specific efflux protein MacA; Region:COG0845MV; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 
 0.642
mdtA
Multidrug resistance protein MdtA; Region:COG0845MV; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 
 0.600
APG90622.1
Membrane efflux protein; Region:COG0845MV; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 
 0.567
APG92101.1
RND family efflux transporter MFP subunit; Region:COG0845MV; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 
 0.535
Your Current Organism:
Sinorhizobium americanum
NCBI taxonomy Id: 194963
Other names: ATCC BAA-532, CIP 108390, DSM 15007, Ensifer americanum, Ensifer americanus, Ensifer americanus corrig. (Toledo et al. 2003) Wang et al. 2015, Ensifer sp. AC14c, Ensifer sp. CFNEI 156, S. americanum, Sinorhizobium americanum Toledo et al. 2004, Sinorhizobium americanus, Sinorhizobium sp. CFNEI 156, Sinorhizobium sp. CFNEI 54, strain CFNEI 156
Server load: medium (58%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.