STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APG89825.12-nitropropane dioxygenase-like dioxygenase; Region:COG2070R. (336 aa)    
Predicted Functional Partners:
nirK
Copper-containing nitrite reductase NirK; Region:COG2132DPM; Belongs to the multicopper oxidase family.
     
  0.900
napA
Periplasmic nitrate reductase NapA; Catalytic subunit of the periplasmic nitrate reductase complex NapAB. Receives electrons from NapB and catalyzes the reduction of nitrate to nitrite.
     
  0.900
napB
NapB periplasmic nitrate reductase; Electron transfer subunit of the periplasmic nitrate reductase complex NapAB; Belongs to the NapB family.
     
  0.900
APG89897.1
Erythronolide synthase, modules 3 and 4; Region:COG0236IQ.
  
 
 0.822
fabD
Malonyl CoA-acyl carrier protein transacylase FabD; Region:COG0331I.
  
  
 0.647
acpP
Acyl carrier protein AcpP; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
  
 
 0.593
acpX
Acyl carrier protein AcpXL; Region:COG0236IQ.
  
 
 0.593
nodN
Nodulation protein N; Region:COG2030I.
 
    0.573
APG92181.1
enoyl-CoA hydratase/isomerase/3-hydroxyacyl-CoA dehydrogenase; Region:COG1024I.
 
  
 0.526
fabB
3-oxoacyl-ACP synthase; Region:COG0304IQ; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.
  
  
 0.494
Your Current Organism:
Sinorhizobium americanum
NCBI taxonomy Id: 194963
Other names: ATCC BAA-532, CIP 108390, DSM 15007, Ensifer americanum, Ensifer americanus, Ensifer americanus corrig. (Toledo et al. 2003) Wang et al. 2015, Ensifer sp. AC14c, Ensifer sp. CFNEI 156, S. americanum, Sinorhizobium americanum Toledo et al. 2004, Sinorhizobium americanus, Sinorhizobium sp. CFNEI 156, Sinorhizobium sp. CFNEI 54, strain CFNEI 156
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